Results for 'Alan William Norrie'

965 found
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  1. The ImmPort Antibody Ontology.William Duncan, Travis Allen, Jonathan Bona, Olivia Helfer, Barry Smith, Alan Ruttenberg & Alexander D. Diehl - 2016 - Proceedings of the International Conference on Biological Ontology 1747.
    Monoclonal antibodies are essential biomedical research and clinical reagents that are produced by companies and research laboratories. The NIAID ImmPort (Immunology Database and Analysis Portal) resource provides a long-term, sustainable data warehouse for immunological data generated by NIAID, DAIT and DMID funded investigators for data archiving and re-use. A variety of immunological data is generated using techniques that rely upon monoclonal antibody reagents, including flow cytometry, immunofluorescence, and ELISA. In order to facilitate querying, integration, and reuse of data, standardized terminology (...)
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  2. Symposium on The Space That Separates: A Realist Theory of Art.Dave Elder-Vass, Andrew Sayer, Tobin Nellhaus, Ian Verstegen, Alan Norrie & Nick Wilson - 2022 - Journal of Critical Realism 22 (1):90-121.
    Editor’s NoteThanks to the initiative of Alan Norrie, we are pleased to present here a symposium on Nick Wilson’s book The Space that Separates: A Realist Theory of Art. Several authors have contri...
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  3. Zoroastrianism.Alan Williams - 1998 - Routledge Encyclopedia of Philosophy.
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  4. OBO Foundry in 2021: Operationalizing Open Data Principles to Evaluate Ontologies.Rebecca C. Jackson, Nicolas Matentzoglu, James A. Overton, Randi Vita, James P. Balhoff, Pier Luigi Buttigieg, Seth Carbon, Melanie Courtot, Alexander D. Diehl, Damion Dooley, William Duncan, Nomi L. Harris, Melissa A. Haendel, Suzanna E. Lewis, Darren A. Natale, David Osumi-Sutherland, Alan Ruttenberg, Lynn M. Schriml, Barry Smith, Christian J. Stoeckert, Nicole A. Vasilevsky, Ramona L. Walls, Jie Zheng, Christopher J. Mungall & Bjoern Peters - 2021 - BioaRxiv.
    Biological ontologies are used to organize, curate, and interpret the vast quantities of data arising from biological experiments. While this works well when using a single ontology, integrating multiple ontologies can be problematic, as they are developed independently, which can lead to incompatibilities. The Open Biological and Biomedical Ontologies Foundry was created to address this by facilitating the development, harmonization, application, and sharing of ontologies, guided by a set of overarching principles. One challenge in reaching these goals was that the (...)
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  5. Improving the Quality and Utility of Electronic Health Record Data through Ontologies.Asiyah Yu Lin, Sivaram Arabandi, Thomas Beale, William Duncan, Hicks D., Hogan Amanda, R. William, Mark Jensen, Ross Koppel, Catalina Martínez-Costa, Øystein Nytrø, Jihad S. Obeid, Jose Parente de Oliveira, Alan Ruttenberg, Selja Seppälä, Barry Smith, Dagobert Soergel, Jie Zheng & Stefan Schulz - 2023 - Standards 3 (3):316–340.
    The translational research community, in general, and the Clinical and Translational Science Awards (CTSA) community, in particular, share the vision of repurposing EHRs for research that will improve the quality of clinical practice. Many members of these communities are also aware that electronic health records (EHRs) suffer limitations of data becoming poorly structured, biased, and unusable out of original context. This creates obstacles to the continuity of care, utility, quality improvement, and translational research. Analogous limitations to sharing objective data in (...)
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  6. Mobilising Papua New Guinea’s Conservation Humanities: Research, Teaching, Capacity Building, Future Directions.Jessica A. Stockdale, Jo Middleton, Regina Aina, Gabriel Cherake, Francesca Dem, William Ferea, Arthur Hane-Nou, Willy Huanduo, Alfred Kik, Vojtěch Novotný, Ben Ruli, Peter Yearwood, Jackie Cassell, Alice Eldridge, James Fairhead, Jules Winchester & Alan Stewart - 2024 - Conservation and Society 22 (2):86-96.
    We suggest that the emerging field of the conservation humanities can play a valuable role in biodiversity protection in Papua New Guinea (PNG), where most land remains under collective customary clan ownership. As a first step to mobilising this scholarly field in PNG and to support capacity development for PNG humanities academics, we conducted a landscape review of PNG humanities teaching and research relating to biodiversity conservation and customary land rights. We conducted a systematic literature review, a PNG teaching programme (...)
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  7. The Neurological Disease Ontology.Mark Jensen, Alexander P. Cox, Naveed Chaudhry, Marcus Ng, Donat Sule, William Duncan, Patrick Ray, Bianca Weinstock-Guttman, Barry Smith, Alan Ruttenberg, Kinga Szigeti & Alexander D. Diehl - 2013 - Journal of Biomedical Semantics 4 (42):42.
    We are developing the Neurological Disease Ontology (ND) to provide a framework to enable representation of aspects of neurological diseases that are relevant to their treatment and study. ND is a representational tool that addresses the need for unambiguous annotation, storage, and retrieval of data associated with the treatment and study of neurological diseases. ND is being developed in compliance with the Open Biomedical Ontology Foundry principles and builds upon the paradigm established by the Ontology for General Medical Science (OGMS) (...)
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  8. Ontologies for the study of neurological disease.Alexander P. Cox, Mark Jensen, William Duncan, Bianca Weinstock-Guttman, Kinga Szigeti, Alan Ruttenberg, Barry Smith & Alexander D. Diehl - 2012 - In Alexander P. Cox, Mark Jensen, William Duncan, Bianca Weinstock-Guttman, Kinga Szigeti, Alan Ruttenberg, Barry Smith & Alexander D. Diehl (eds.), Towards an Ontology of Mental Functioning (ICBO Workshop), Third International Conference on Biomedical Ontology. Graz:
    We have begun work on two separate but related ontologies for the study of neurological diseases. The first, the Neurological Disease Ontology (ND), is intended to provide a set of controlled, logically connected classes to describe the range of neurological diseases and their associated signs and symptoms, assessments, diagnoses, and interventions that are encountered in the course of clinical practice. ND is built as an extension of the Ontology for General Medical Sciences — a high-level candidate OBO Foundry ontology that (...)
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  9. Protein Ontology: Enhancing and scaling up the representation of protein entities.Darren A. Natale, Cecilia N. Arighi, Judith A. Blake, Jonathan Bona, Chuming Chen, Sheng-Chih Chen, Karen R. Christie, Julie Cowart, Peter D'Eustachio, Alexander D. Diehl, Harold J. Drabkin, William D. Duncan, Hongzhan Huang, Jia Ren, Karen Ross & Alan Ruttenberg - 2017 - Nucleic Acids Research 45 (D1):D339-D346.
    The Protein Ontology (PRO; http://purl.obolibrary.org/obo/pr) formally defines and describes taxon-specific and taxon-neutral protein-related entities in three major areas: proteins related by evolution; proteins produced from a given gene; and protein-containing complexes. PRO thus serves as a tool for referencing protein entities at any level of specificity. To enhance this ability, and to facilitate the comparison of such entities described in different resources, we developed a standardized representation of proteoforms using UniProtKB as a sequence reference and PSI-MOD as a post-translational modification (...)
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  10. “Empiricism contra Experiment: Harvey, Locke and the Revisionist View of Experimental Philosophy”.Alan Salter & Charles T. Wolfe - 2009 - Bulletin d'histoire et d'épistémologie des sciences de la vie 16 (2):113-140.
    In this paper we suggest a revisionist perspective on two significant figures in early modern life science and philosophy: William Harvey and John Locke. Harvey, the discoverer of the circulation of the blood, is often named as one of the rare representatives of the ‘life sciences’ who was a major figure in the Scientific Revolution. While this status itself is problematic, we would like to call attention to a different kind of problem: Harvey dislikes abstraction and controlled experiments (aside (...)
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  11. Power to the (Right) People: Reply to Critics.Larry Alan Busk - 2024 - Critical Review: A Journal of Politics and Society 36 (1-2):92-118.
    This article responds to four critics of Democracy in Spite of the Demos and reiterates its central thesis. Christopher Holman and Théophile Pénigaud attempt to maintain the critical value of democracy by invoking different elements of the deliberative tradition, while Benjamin Schupmann answers my charges by appealing to a strong liberal constitutionalism. I argue that these attempts repeat the ambivalence described and criticized in the book: democracy is taken as an end in itself, but with asterisks that introduce conditions and (...)
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  12. Perils of the Open Road.William Lane Craig & David P. Hunt - 2013 - Faith and Philosophy 30 (1):49-71.
    Open theists deny that God knows future contingents. Most open theists justify this denial by adopting the position that there are no future contingent truths to be known. In this paper we examine some of the arguments put forward for this position in two recent articles in this journal, one by Dale Tuggy and one by Alan Rhoda, Gregory Boyd, and Thomas Belt. The arguments concern time, modality, and the semantics of ‘will’ statements. We explain why we find none (...)
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  13. Does Death Give Meaning to Life?Brooke Alan Trisel - 2015 - Journal of Philosophy of Life 5 (2):62-81.
    Some people claim that death makes our lives meaningless. Bernard Williams and Viktor Frankl have made the opposite claim that death gives meaning to life. Although there has been much scrutiny of the former claim, the latter claim has received very little attention. In this paper, I will explore whether and how death gives meaning to our lives. As I will argue, there is not sufficient support for the strong claim that death is necessary for one's life to be meaningful. (...)
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  14. Review Essay: Apprehending the “Social”.Slava Sadovnikov - 2008 - Philosophy of the Social Sciences 38 (4):533-544.
    The two books reviewed here are different efforts to embrace the vast subject called “social thought.” The second edition of The Blackwell Dictionary of Modern Social Thought, edited by William Outhwaite with Alain Touraine, contains numerous updates; yet it also has some disadvantages compared to the first edition. Social Thought: From the Enlightenment to the Present, edited by Alan Sica, is a bold but controversial attempt at gathering in one anthology as many social thinkers as possible.
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  15. Revisiting Turing and His Test: Comprehensiveness, Qualia, and the Real World.Vincent C. Müller & Aladdin Ayesh (eds.) - 2012 - AISB.
    Proceedings of the papers presented at the Symposium on "Revisiting Turing and his Test: Comprehensiveness, Qualia, and the Real World" at the 2012 AISB and IACAP Symposium that was held in the Turing year 2012, 2–6 July at the University of Birmingham, UK. Ten papers. - http://www.pt-ai.org/turing-test --- Daniel Devatman Hromada: From Taxonomy of Turing Test-Consistent Scenarios Towards Attribution of Legal Status to Meta-modular Artificial Autonomous Agents - Michael Zillich: My Robot is Smarter than Your Robot: On the Need for (...)
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  16. Contemporary Approaches to the Philosophy of Lying.James Mahon - 2018 - In Jörg Meibauer (ed.), The Oxford Handbook of Lying. Oxford, United Kingdom: Oxford Handbooks. pp. 32-55.
    The chapter examines fifty years of philosophers working on lying - from the 1970s to the current day – focusing on how lying is defined (descriptively and normatively), whether lying involves an intention to deceive (Deceptionists) or not (Non-Deceptionists), why lying is wrong, and whether lying is worse than other forms of deception, including misleading with the truth. Philosophers discussed include Roderick Chisholm and Thomas Feehan, Alan Donagan, Sissela Boy, Charles Fried, David Simpson, David Simpson, Bernard Williams, Paul Faulkner, (...)
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  17. Dinî Tecrübe Delilinde Sezginin Yeri ve Önemi.Aysel Tan - 2019 - Malatya, Türkiye: İspec.
    Dinî tecrübe Friedrich Schleiermacher (ö.1768) ile önem kazanan ve William James’in (ö.1842) eserleriyle din felsefesinde teistik delillerin içine dahil olan bir delildir. Dini tecrübelerin birçok şekilde meydana geldiği iddia edilmektedir. Bunlardan biri de sezgidir. Bu bildirinin amacı sezgisel bilginin Tanrı’nın varlığına delil olup olmadığını ortaya koymaktır. Sezgisel yetenek, insanın fiziksel gelişimine (yani beyin) paralel olarak gelişen bir yetidir ve zihnin gelişmesiyle birlikte kapasitesi artmaktadır. Önce çocukta duygusal bir sezgi hakim iken (4-7 yaş), daha sonra çocuğun somut işlemlere geçmesiyle sezgisel (...)
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  18. Gametogênese Animal: Espermatogênese e Ovogênese.Emanuel Isaque Cordeiro da Silva - manuscript
    GAMETOGÊNESE -/- Emanuel Isaque Cordeiro da Silva Instituto Agronômico de Pernambuco Departamento de Zootecnia – UFRPE Embrapa Semiárido -/- • _____OBJETIVO -/- Os estudantes bem informados, estão a buscando conhecimento a todo momento. O estudante de Veterinária e Zootecnia, sabe que a Reprodução é uma área de primordial importância para sua carreira. Logo, o conhecimento da mesma torna-se indispensável. No primeiro trabalho da série fisiologia reprodutiva dos animais domésticos, foi abordado de forma clara, didática e objetiva os mecanismos de diferenciação (...)
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  19. Hormônios e Sistema Endócrino na Reprodução Animal.Emanuel Isaque Cordeiro da Silva & Emanuel Isaque Da Silva - manuscript
    HORMÔNIOS E SISTEMA ENDÓCRINO NA REPRODUÇÃO ANIMAL -/- OBJETIVO -/- As glândulas secretoras do corpo são estudadas pelo ramo da endocrinologia. O estudante de Veterinária e/ou Zootecnia que se preze, deverá entender os processos fisio-lógicos que interagem entre si para a estimulação das glândulas para a secreção de vários hormônios. -/- Os hormônios, dentro do animal, possuem inúmeras funções; sejam exercendo o papel sobre a nutrição, sobre a produção de leite e sobre a reprodução, os hormônios desempenham um primordial papel (...)
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  20. Modesty, asymmetry, and hypocrisy.Hans Maes - 2004 - Journal of Value Inquiry 38 (4):485-497.
    Numerous philosophers have tried to define modesty, but none of them succeeds in articulating the necessary and sufficient conditions for this virtue. Moreover, all existing accounts ignore the striking self-other asymmetry that is at the heart of modesty. Drawing on the analogy with the practice of giving presents, I clarify and further investigate this self-other asymmetry. In the process, I show why Bernard Williams is right in pointing out the notorious truth that a modest person does not act under the (...)
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  21. Mental images, imagination and the "multiple use thesis".Kathleen Stock - manuscript
    My topic is a certain view about mental images: namely, the ‘Multiple Use Thesis’. On this view, at least some mental image-types, individuated in terms of the sum total of their representational content, are potentially multifunctional: a given mental image-type, individuated as indicated, can serve in a variety of imaginative-event-types. As such, the presence of an image is insufficient to individuate the content of those imagination-events in which it may feature. This picture is argued for, or (more usually) just assumed (...)
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  22. Science Under Attack.Nicholas Maxwell - 2005 - The Philosopher’s Magazine 31:37-41.
    Science has been under attack ever since William Blake and Romantic movement. In our time, criticisms of modern science have led to Alan Sokal's spoof, and the so-called science wars. Both sides missed the point. Science deserves to be criticized for seriously misrepresenting its highly problematic aims, which have metaphysical, value and political assumptions associated with them. Instead of repressing these problematic aims, science ought rather to make them explicit, so that they can be critically assessed and, we (...)
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  23. Tıbbî Açıdan Dinî Tecrübe.Aysel Tan - 2019 - Diyarbakır, Türkiye: Ubak.
    Her din ve mistik kültürde ortaya çıkan dinî tecrübelerin felsefe, kelam ve fıkıh gibi bilim alanlarında farklı açıklamaları yapılmış, akli olup olmadığı sorgulanmıştır. Vahiy, keramet, vecd, hulul, tecelli gibi kavramlara açıklamalar getirilmiştir. Fakat bu tür tecrübelerin insanın fizyolojik ve psikolojik mekanizmalarıyla ne tür bir bağlantısı olduğu İslam düşünce geleneğinde pek tartışılmamıştır. Bu tür tecrübe yaşayan kişilerin sorunlu olup olmadığı tıbbi açıdan değerlendirilmemiştir. Dini tecrübeleri tıbbî bir sorun olarak ele alıp bu tecrübeleri ‘deney’ konusu yaparak inceleyen ilk düşünür William James’tir (...)
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  24. Is evidence of evidence evidence? Screening-off vs. no-defeaters.Roche William - 2018 - Episteme 15 (4):451-462.
    I argue elsewhere (Roche 2014) that evidence of evidence is evidence under screening-off. Tal and Comesaña (2017) argue that my appeal to screening-off is subject to two objections. They then propose an evidence of evidence thesis involving the notion of a defeater. There is much to learn from their very careful discussion. I argue, though, that their objections fail and that their evidence of evidence thesis is open to counterexample.
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  25. Elucidating open theism.Joshua R. Sijuwade - 2023 - International Journal for Philosophy of Religion 94 (2):151-175.
    In this article, I seek to provide a philosophical elucidation of the thesis of open theism. This task will be performed by utilising the conception of open theism, Generic Open Theism, provided by Alan Rhoda (and precisified in part by William Hasker). This conception will then be further elucidated through the employment of the notion of libertarianism, as proposed by Robert Kane, which will enable the thesis of Generic Open Theism to be shown to not be subject to (...)
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  26. A note on confirmation and Matthew properties.Roche William - 2014 - Logic and Philosophy of Science 12:91-101.
    There are numerous (Bayesian) confirmation measures in the literature. Festa provides a formal characterization of a certain class of such measures. He calls the members of this class “incremental measures”. Festa then introduces six rather interesting properties called “Matthew properties” and puts forward two theses, hereafter “T1” and “T2”, concerning which of the various extant incremental measures have which of the various Matthew properties. Festa’s discussion is potentially helpful with the problem of measure sensitivity. I argue, that, while Festa’s discussion (...)
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  27. Is coherentism inconsistent?Roche William - 2011 - Southwest Philosophical Studies 33:84-90.
    Can a perceptual experience justify (epistemically) a belief? More generally, can a nonbelief justify a belief? Coherentists answer in the negative: Only a belief can justify a belief. A perceptual experience can cause a belief but cannot justify a belief. Coherentists eschew all noninferential justification—justification independent of evidential support from beliefs—and, with it, the idea that justification has a foundation. Instead, justification is holistic in structure. Beliefs are justified together, not in isolation, as members of a coherent belief system. The (...)
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  28. Modal Collapse and Modal Fallacies: No Easy Defense of Simplicity.John William Waldrop - 2022 - American Philosophical Quarterly 59 (2):161-179.
    I critically examine the claim that modal collapse arguments against the traditional doctrine of divine simplicity (DDS) are in general fallacious. In a recent paper, Christopher Tomaszewski alleges that modal collapse arguments against DDS are invalid, owing to illicit substitutions of nonrigid singular terms into intensional contexts. I show that this is not, in general, the case. I show, further, that where existing modal collapse arguments are vulnerable to this charge the arguments can be repaired without any apparent dialectical impropriety. (...)
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  29. Parental Compromise.Marcus William Hunt - 2022 - Critical Review of International Social and Political Philosophy 25 (2):260-280.
    I examine how co-parents should handle differing commitments about how to raise their child. Via thought experiment and the examination of our practices and affective reactions, I argue for a thesis about the locus of parental authority: that parental authority is invested in full in each individual parent, meaning that that the command of one parent is sufficient to bind the child to act in obedience. If this full-authority thesis is true, then for co-parents to command different things would be (...)
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  30. On the Criminal Culpability of Successful and Unsucessful Psychopaths.Katrina L. Sifferd & William Hirstein - 2013 - Neuroethics 6 (1):129-140.
    The psychological literature now differentiates between two types of psychopath:successful (with little or no criminal record) and unsuccessful (with a criminal record). Recent research indicates that earlier findings of reduced autonomic activity, reduced prefrontal grey matter, and compromised executive activity may only be true of unsuccessful psychopaths. In contrast, successful psychopaths actually show autonomic and executive function that exceeds that of normals, while having no difference in prefrontal volume from normals. We argue that many successful psychopaths are legally responsible for (...)
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  31. Intrinsicality without naturalness.D. Gene Witmer, William Butchard & Kelly Trogdon - 2005 - Philosophy and Phenomenological Research 70 (2):326–350.
    Defense of an account of intrinsic properties in terms of (what is now called) grounding rather than naturalness.
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  32. A problem for counterfactual sufficiency.John William Waldrop - 2023 - Analysis 83 (3):527-535.
    The consequence argument purports to show that determinism is true only if no one has free will. Judgments about whether the argument is sound depend on how one understands locutions of the form 'p and no one can render p false'. The main interpretation on offer appeals to counterfactual sufficiency: s can render p false just in case there is something s can do such that, were s to do it, p would be false; otherwise, s cannot render p false. (...)
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  33. Contextual Vocabulary Acquisition: from Algorithm to Curriculum.Michael W. Kibby & William J. Rapaport - 2014 - In Michael W. Kibby & William J. Rapaport (eds.), Contextual Vocabulary Acquisition: from Algorithm to Curriculum. pp. 107-150.
    Deliberate contextual vocabulary acquisition (CVA) is a reader’s ability to figure out a (not the) meaning for an unknown word from its “context”, without external sources of help such as dictionaries or people. The appropriate context for such CVA is the “belief-revised integration” of the reader’s prior knowledge with the reader’s “internalization” of the text. We discuss unwarranted assumptions behind some classic objections to CVA, and present and defend a computational theory of CVA that we have adapted to a new (...)
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  34. The perception of phantom Limbs: The D. O. Hebb lecture.Vilayanur S. Ramachandran & William Hirstein - 1998 - Brain 121:1603-1630.
    Almost everyone who has a limb amputated will experience a phantom limb--the vivid impression that the limb is not only still present, but in some cases, painful. There is now a wealth of empirical evidence demonstrating changes in cortical topography in primates following deafferentation or amputation, and this review will attempt to relate these in a systematic way to the clinical phenomenology of phantom limbs. With the advent of non-invasive imaging techniques such as MEG (magnetoencephalogram) and functional MRI, topographical reorganization (...)
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  35. BFO: Basic Formal Ontology.J. Neil Otte, John Beverley & Alan Ruttenberg - 2022 - Applied ontology 17 (1):17-43.
    Basic Formal Ontology (BFO) is a top-level ontology consisting of thirty-six classes, designed to support information integration, retrieval, and analysis across all domains of scientific investigation, presently employed in over 350 ontology projects around the world. BFO is a genuine top-level ontology, containing no terms particular to material domains, such as physics, medicine, or psychology. In this paper, we demonstrate how a series of cases illustrating common types of change may be represented by universals, defined classes, and relations employing the (...)
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  36. Being Emergence vs. Pattern Emergence: Complexity, Control, and Goal-Directedness in Biological Systems.Jason Winning & William Bechtel - 2018 - In Sophie Gibb, Robin Findlay Hendry & Tom Lancaster (eds.), The Routledge Handbook of Philosophy of Emergence. New York: Routledge. pp. 134-144.
    Emergence is much discussed by both philosophers and scientists. But, as noted by Mitchell (2012), there is a significant gulf; philosophers and scientists talk past each other. We contend that this is because philosophers and scientists typically mean different things by emergence, leading us to distinguish being emergence and pattern emergence. While related to distinctions offered by others between, for example, strong/weak emergence or epistemic/ontological emergence (Clayton, 2004, pp. 9–11), we argue that the being vs. pattern distinction better captures what (...)
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  37. Explanatory Pluralism and The Heuristic Identity Theory.Robert N. McCauley & William Bechtel - 2001 - Theory & Psychology 11 (6):736–760.
    Explanatory pluralism holds that the sorts of comprehensive theoretical and ontological economies, which microreductionists and New Wave reductionists envision and which antireductionists fear, offer misleading views of both scientific practice and scientific progress. Both advocates and foes of employing reductionist strategies at the interface of psychology and neuroscience have overplayed the alleged economies that interlevel connections (including identities) justify while overlooking their fundamental role in promoting scientific research. A brief review of research on visual processing provides support for the explanatory (...)
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  38. (1 other version)Mechanisms and psychological explanation.Cory Wright & William Bechtel - 2006 - In Paul Thagard (ed.), Handbook of the Philosophy of Psychology and Cognitive Science. Elsevier.
    As much as assumptions about mechanisms and mechanistic explanation have deeply affected psychology, they have received disproportionately little analysis in philosophy. After a historical survey of the influences of mechanistic approaches to explanation of psychological phenomena, we specify the nature of mechanisms and mechanistic explanation. Contrary to some treatments of mechanistic explanation, we maintain that explanation is an epistemic activity that involves representing and reasoning about mechanisms. We discuss the manner in which mechanistic approaches serve to bridge levels rather than (...)
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  39. String theory.John Corcoran, William Frank & Michael Maloney - 1974 - Journal of Symbolic Logic 39 (4):625-637.
    For each positive n , two alternative axiomatizations of the theory of strings over n alphabetic characters are presented. One class of axiomatizations derives from Tarski's system of the Wahrheitsbegriff and uses the n characters and concatenation as primitives. The other class involves using n character-prefixing operators as primitives and derives from Hermes' Semiotik. All underlying logics are second order. It is shown that, for each n, the two theories are definitionally equivalent [or synonymous in the sense of deBouvere]. It (...)
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  40. How Might a Stoic Eat in Accordance with Nature and “Environmental Facts”?Kai Whiting, William O. Stephens, Edward Simpson & Leonidas Konstantakos - 2020 - Journal of Agricultural and Environmental Ethics 33 (3):369-389.
    This paper explores how to deliberate about food choices from a Stoic perspective informed by the value of environmental sustainability. This perspective is reconstructed from both ancient and contemporary sources of Stoic philosophy. An account of what the Stoic goal of “living in agreement with Nature” would amount to in dietary practice is presented. Given ecological facts about food production, an argument is made that Stoic virtue made manifest as wisdom, justice, courage, and temperance compel Stoic practitioners to select locally (...)
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  41. Relations in Biomedical Ontologies.Barry Smith, Werner Ceusters, Bert Klagges, Jacob Köhler, Anand Kuma, Jane Lomax, Chris Mungall, , Fabian Neuhaus, Alan Rector & Cornelius Rosse - 2005 - Genome Biology 6 (5):R46.
    To enhance the treatment of relations in biomedical ontologies we advance a methodology for providing consistent and unambiguous formal definitions of the relational expressions used in such ontologies in a way designed to assist developers and users in avoiding errors in coding and annotation. The resulting Relation Ontology can promote interoperability of ontologies and support new types of automated reasoning about the spatial and temporal dimensions of biological and medical phenomena.
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  42.  87
    Decisional Value Scores.Gabriella Waters, William Mapp & Phillip Honenberger - 2024 - AI and Ethics 2024.
    Research in ethical AI has made strides in quantitative expression of ethical values such as fairness, transparency, and privacy. Here we contribute to this effort by proposing a new family of metrics called “decisional value scores” (DVS). DVSs are scores assigned to a system based on whether the decisions it makes meet or fail to meet a particular standard (either individually, in total, or as a ratio or average over decisions made). Advantages of DVS include greater discrimination capacity between types (...)
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  43.  66
    I Contain Multitudes: A Typology of Digital Doppelgängers.William D'Alessandro, Trenton W. Ford & Michael Yankoski - forthcoming - American Journal of Bioethics.
    In "Digital Doppelgängers and Lifespan Extension: What Matters?", Iglesias et al. argue that “some of the aims or ostensible goods of person-span expansion could plausibly be fulfilled in part by creating a digital doppelgänger”. Since person-extension aims are deeply heterogeneous, however, no single type of doppelgänger system is likely to suffice to meet all such needs. We propose a partial typology of doppelgängers—the family heirloom, the research archive, the public legacy, the project surrogate—and suggest appropriate training methods, design features and (...)
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  44. True Belief Belies False Belief: Recent Findings of Competence in Infants and Limitations in 5-Year-Olds, and Implications for Theory of Mind Development.Joseph A. Hedger & William V. Fabricius - 2011 - Review of Philosophy and Psychology 2 (3):429-447.
    False belief tasks have enjoyed a monopoly in the research on children’s development of a theory of mind. They have been granted this status because they promise to deliver an unambiguous assessment of children’s understanding of the representational nature of mental states. Their poor cousins, true belief tasks, have been relegated to occasional service as control tasks. That this is their only role has been due to the universal assumption that correct answers on true belief tasks are inherently ambiguous regarding (...)
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  45. The Ontology for Biomedical Investigations.Anita Bandrowski, Ryan Brinkman, Mathias Brochhausen, Matthew H. Brush, Bill Bug, Marcus C. Chibucos, Kevin Clancy, Mélanie Courtot, Dirk Derom, Michel Dumontier, Liju Fan, Jennifer Fostel, Gilberto Fragoso, Frank Gibson, Alejandra Gonzalez-Beltran, Melissa A. Haendel, Yongqun He, Mervi Heiskanen, Tina Hernandez-Boussard, Mark Jensen, Yu Lin, Allyson L. Lister, Phillip Lord, James Malone, Elisabetta Manduchi, Monnie McGee, Norman Morrison, James A. Overton, Helen Parkinson, Bjoern Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Richard H. Scheuermann, Daniel Schober, Barry Smith, Larisa N. Soldatova, Christian J. Stoeckert, Chris F. Taylor, Carlo Torniai, Jessica A. Turner, Randi Vita, Patricia L. Whetzel & Jie Zheng - 2016 - PLoS ONE 11 (4):e0154556.
    The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with precisely defined meanings to describe all aspects of how investigations in the biological and medical domains are conducted. OBI re-uses ontologies that provide a representation of biomedical knowledge from the Open Biological and Biomedical Ontologies (OBO) project and adds the ability to describe how this knowledge was derived. We here describe the state of OBI and several applications that are using it, such as adding semantic expressivity to (...)
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  46. Toll-like receptor signaling in vertebrates: Testing the integration of protein, complex, and pathway data in the Protein Ontology framework.Cecilia Arighi, Veronica Shamovsky, Anna Maria Masci, Alan Ruttenberg, Barry Smith, Darren Natale, Cathy Wu & Peter D’Eustachio - 2015 - PLoS ONE 10 (4):e0122978.
    The Protein Ontology provides terms for and supports annotation of species-specific protein complexes in an ontology framework that relates them both to their components and to species-independent families of complexes. Comprehensive curation of experimentally known forms and annotations thereof is expected to expose discrepancies, differences, and gaps in our knowledge. We have annotated the early events of innate immune signaling mediated by Toll-Like Receptor 3 and 4 complexes in human, mouse, and chicken. The resulting ontology and annotation data set has (...)
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  47. The SNePS Family.Stuart C. Shapiro & William J. Rapaport - 1992 - Computers and Mathematics with Applications 23:243-275.
    SNePS, the Semantic Network Processing System 45, 54], has been designed to be a system for representing the beliefs of a natural-language-using intelligent system (a \cognitive agent"). It has always been the intention that a SNePS-based \knowledge base" would ultimatelybe built, not by a programmeror knowledge engineer entering representations of knowledge in some formallanguage or data entry system, but by a human informing it using a natural language (NL) (generally supposed to be English), or by the system reading books or (...)
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  48. Models and minds.Stuart C. Shapiro & William J. Rapaport - 1991 - In Robert C. Cummins (ed.), Philosophy and AI: Essays at the Interface. Cambridge: MIT Press. pp. 215--259.
    Cognitive agents, whether human or computer, that engage in natural-language discourse and that have beliefs about the beliefs of other cognitive agents must be able to represent objects the way they believe them to be and the way they believe others believe them to be. They must be able to represent other cognitive agents both as objects of beliefs and as agents of beliefs. They must be able to represent their own beliefs, and they must be able to represent beliefs (...)
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  49. Root Causes.Matthew Arnatt - manuscript
    One theoretical charge (of Optimality Theory in its early conception) must have been to retain that sense of qualitative particularity as affecting as constraining theory relevant to a proscribed field when clearly a motivation was to divine in circumscriptions operational consequences conceived on a deferred abstractive level. An attraction of the theory's embodying results of constraint interactions as responsive to theory-internal qualitative implementation, as being in fact supplementarily transparent to co-ordinations of variously language specific implementations, qualitative identifications, was apparent naturalistic (...)
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  50. Broad’s Accounts of Temporal Experience.Oliver William Rashbrook - 2012 - Journal for the History of Analytical Philosophy 1 (5).
    Two extremely detailed accounts of temporal experience can be found in the work of C. D. Broad. These accounts have been subject to considerable criticism. I argue that, when we look more carefully at Broad’s work, we find that much of this criticism fails to find its target. I show that the objection that ultimately proves troubling for Broad stems from his commitment to two principles: i) the Thin-PSA, and ii) the ‘Overlap’ claim. I use this result to demonstrate that (...)
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